LITCHi
Cluster HIVvsMockinLatency-Up_in-Mock is enriched in the following gene classes
GeneSet DB Hit Count
TF_miRNA Targets.gmt GeneSets 43
Pathways - KEGG_BioCarta.gmt GeneSets 8
Pathways - Reactome.gmt GeneSets 20
Chromosomal Bands.gmt GeneSets 7
GO - Molecular Function.gmt GeneSets 8
GO - Cellular Component.gmt GeneSets 10
HIV Collection.gmt GeneSets 1
GO - Biological Process.gmt GeneSets 87
Cluster Name GeneSet Name GeneSet DB log(P) Qvalue Observed in Background Observed in Cluster Expected in Cluster
HIVvsMockinLatency-Up in-Mock chr14q11 Chromosomal Bands.gmt GeneSets -5.5 0.0 107.0 7.0 0.88
HIVvsMockinLatency-Up in-Mock chr22q11 Chromosomal Bands.gmt GeneSets -2.7 0.00189 63.0 3.0 0.52
HIVvsMockinLatency-Up in-Mock chr1q23 Chromosomal Bands.gmt GeneSets -4.6 2.0E-5 41.0 4.0 0.34
HIVvsMockinLatency-Up in-Mock chr22q12 Chromosomal Bands.gmt GeneSets -2.6 0.00224 66.0 3.0 0.54
HIVvsMockinLatency-Up in-Mock chr7q34 Chromosomal Bands.gmt GeneSets -9.1 0.0 56.0 8.0 0.46
HIVvsMockinLatency-Up in-Mock chr17q11 Chromosomal Bands.gmt GeneSets -2.6 0.00224 66.0 3.0 0.54
HIVvsMockinLatency-Up in-Mock chr15q21 Chromosomal Bands.gmt GeneSets -4.1 7.0E-5 52.0 4.0 0.43
HIVvsMockinLatency-Up in-Mock REGULATION OF BIOLOGICAL QUALITY GO - Biological Process.gmt GeneSets -5.5 1.0E-4 230.0 10.0 1.89
HIVvsMockinLatency-Up in-Mock NEGATIVE REGULATION OF CELLULAR METABOLIC PROCESS GO - Biological Process.gmt GeneSets -2.2 0.0148 200.0 5.0 1.65
HIVvsMockinLatency-Up in-Mock SYSTEM DEVELOPMENT GO - Biological Process.gmt GeneSets -2.0 0.02008 429.0 8.0 3.53
HIVvsMockinLatency-Up in-Mock POSITIVE REGULATION OF SIGNAL TRANSDUCTION GO - Biological Process.gmt GeneSets -3.7 0.00102 103.0 5.0 0.85
HIVvsMockinLatency-Up in-Mock HEMOSTASIS GO - Biological Process.gmt GeneSets -4.2 4.5E-4 25.0 3.0 0.21
HIVvsMockinLatency-Up in-Mock ENZYME LINKED RECEPTOR PROTEIN SIGNALING PATHWAY GO - Biological Process.gmt GeneSets -2.9 0.00411 96.0 4.0 0.79
HIVvsMockinLatency-Up in-Mock MULTI ORGANISM PROCESS GO - Biological Process.gmt GeneSets -4.5 3.0E-4 73.0 5.0 0.6
HIVvsMockinLatency-Up in-Mock POSITIVE REGULATION OF CELL PROLIFERATION GO - Biological Process.gmt GeneSets -3.0 0.00382 94.0 4.0 0.77
HIVvsMockinLatency-Up in-Mock JAK STAT CASCADE GO - Biological Process.gmt GeneSets -4.1 4.7E-4 27.0 3.0 0.22
HIVvsMockinLatency-Up in-Mock NEGATIVE REGULATION OF CELLULAR PROTEIN METABOLIC PROCESS GO - Biological Process.gmt GeneSets -3.8 8.0E-4 32.0 3.0 0.26
HIVvsMockinLatency-Up in-Mock ESTABLISHMENT OF LOCALIZATION GO - Biological Process.gmt GeneSets -1.8 0.03076 553.0 9.0 4.55
HIVvsMockinLatency-Up in-Mock REGULATION OF KINASE ACTIVITY GO - Biological Process.gmt GeneSets -1.8 0.03279 120.0 3.0 0.99
HIVvsMockinLatency-Up in-Mock REGULATION OF PROTEIN KINASE ACTIVITY GO - Biological Process.gmt GeneSets -1.8 0.03139 118.0 3.0 0.97
HIVvsMockinLatency-Up in-Mock REGULATION OF MOLECULAR FUNCTION GO - Biological Process.gmt GeneSets -3.1 0.00301 237.0 7.0 1.95
HIVvsMockinLatency-Up in-Mock SIGNAL TRANSDUCTION GO - Biological Process.gmt GeneSets -4.5 3.0E-4 1024.0 21.0 8.42
HIVvsMockinLatency-Up in-Mock REGULATION OF PROTEIN AMINO ACID PHOSPHORYLATION GO - Biological Process.gmt GeneSets -4.5 3.1E-4 22.0 3.0 0.18
HIVvsMockinLatency-Up in-Mock SECRETION BY CELL GO - Biological Process.gmt GeneSets -2.3 0.01287 84.0 3.0 0.69
HIVvsMockinLatency-Up in-Mock CELL SURFACE RECEPTOR LINKED SIGNAL TRANSDUCTION GO 0007166 GO - Biological Process.gmt GeneSets -4.2 4.5E-4 319.0 10.0 2.62
HIVvsMockinLatency-Up in-Mock REGULATION OF TRANSFERASE ACTIVITY GO - Biological Process.gmt GeneSets -1.7 0.03514 123.0 3.0 1.01
HIVvsMockinLatency-Up in-Mock POSITIVE REGULATION OF CATALYTIC ACTIVITY GO - Biological Process.gmt GeneSets -2.7 0.00564 106.0 4.0 0.87
HIVvsMockinLatency-Up in-Mock ESTABLISHMENT OF CELLULAR LOCALIZATION GO - Biological Process.gmt GeneSets -2.6 0.00679 283.0 7.0 2.33
HIVvsMockinLatency-Up in-Mock REGULATION OF PROTEIN MODIFICATION PROCESS GO - Biological Process.gmt GeneSets -3.7 0.00102 35.0 3.0 0.29
HIVvsMockinLatency-Up in-Mock CARBOXYLIC ACID METABOLIC PROCESS GO - Biological Process.gmt GeneSets -1.8 0.03075 116.0 3.0 0.95
HIVvsMockinLatency-Up in-Mock REGULATION OF TRANSLATION GO - Biological Process.gmt GeneSets -2.6 0.00644 66.0 3.0 0.54
HIVvsMockinLatency-Up in-Mock DEFENSE RESPONSE GO - Biological Process.gmt GeneSets -4.0 5.1E-4 127.0 6.0 1.04
HIVvsMockinLatency-Up in-Mock BEHAVIOR GO - Biological Process.gmt GeneSets -4.1 4.7E-4 52.0 4.0 0.43
HIVvsMockinLatency-Up in-Mock REGULATION OF PROTEIN METABOLIC PROCESS GO - Biological Process.gmt GeneSets -4.0 5.2E-4 128.0 6.0 1.05
HIVvsMockinLatency-Up in-Mock REGULATION OF SIGNAL TRANSDUCTION GO - Biological Process.gmt GeneSets -3.2 0.00248 173.0 6.0 1.42
HIVvsMockinLatency-Up in-Mock NEGATIVE REGULATION OF PROTEIN METABOLIC PROCESS GO - Biological Process.gmt GeneSets -3.7 9.7E-4 34.0 3.0 0.28
HIVvsMockinLatency-Up in-Mock LOCOMOTORY BEHAVIOR GO - Biological Process.gmt GeneSets -4.9 2.0E-4 36.0 4.0 0.3
HIVvsMockinLatency-Up in-Mock REGULATION OF BODY FLUID LEVELS GO - Biological Process.gmt GeneSets -4.2 4.5E-4 26.0 3.0 0.21
HIVvsMockinLatency-Up in-Mock CYTOKINE PRODUCTION GO - Biological Process.gmt GeneSets -3.3 0.002 43.0 3.0 0.35
HIVvsMockinLatency-Up in-Mock REGULATION OF PHOSPHORYLATION GO - Biological Process.gmt GeneSets -3.7 0.00102 35.0 3.0 0.29
HIVvsMockinLatency-Up in-Mock ORGANIC ACID METABOLIC PROCESS GO - Biological Process.gmt GeneSets -1.8 0.03139 118.0 3.0 0.97
HIVvsMockinLatency-Up in-Mock BLOOD COAGULATION GO - Biological Process.gmt GeneSets -4.5 3.0E-4 21.0 3.0 0.17
HIVvsMockinLatency-Up in-Mock MONOCARBOXYLIC ACID METABOLIC PROCESS GO - Biological Process.gmt GeneSets -3.0 0.00351 53.0 3.0 0.44
HIVvsMockinLatency-Up in-Mock MULTICELLULAR ORGANISMAL DEVELOPMENT GO - Biological Process.gmt GeneSets -2.8 0.00511 538.0 11.0 4.43
HIVvsMockinLatency-Up in-Mock POSITIVE REGULATION OF CELLULAR PROTEIN METABOLIC PROCESS GO - Biological Process.gmt GeneSets -3.2 0.00273 48.0 3.0 0.39
HIVvsMockinLatency-Up in-Mock INFLAMMATORY RESPONSE GO - Biological Process.gmt GeneSets -2.8 0.00521 61.0 3.0 0.5
HIVvsMockinLatency-Up in-Mock CELLULAR CATION HOMEOSTASIS GO - Biological Process.gmt GeneSets -5.4 1.0E-4 50.0 5.0 0.41
HIVvsMockinLatency-Up in-Mock REGULATION OF CELLULAR METABOLIC PROCESS GO - Biological Process.gmt GeneSets -1.9 0.02582 615.0 10.0 5.06
HIVvsMockinLatency-Up in-Mock RESPONSE TO CHEMICAL STIMULUS GO - Biological Process.gmt GeneSets -2.4 0.00989 181.0 5.0 1.49
HIVvsMockinLatency-Up in-Mock POST TRANSLATIONAL PROTEIN MODIFICATION GO - Biological Process.gmt GeneSets -1.9 0.0254 374.0 7.0 3.08
HIVvsMockinLatency-Up in-Mock IMMUNE RESPONSE GO - Biological Process.gmt GeneSets -2.3 0.01287 135.0 4.0 1.11
HIVvsMockinLatency-Up in-Mock POSITIVE REGULATION OF METABOLIC PROCESS GO - Biological Process.gmt GeneSets -2.5 0.00776 170.0 5.0 1.4
HIVvsMockinLatency-Up in-Mock RESPONSE TO BIOTIC STIMULUS GO - Biological Process.gmt GeneSets -2.6 0.00718 69.0 3.0 0.57
HIVvsMockinLatency-Up in-Mock PROTEIN KINASE CASCADE GO - Biological Process.gmt GeneSets -1.9 0.0272 236.0 5.0 1.94
HIVvsMockinLatency-Up in-Mock RESPONSE TO OTHER ORGANISM GO - Biological Process.gmt GeneSets -3.5 0.00161 40.0 3.0 0.33
HIVvsMockinLatency-Up in-Mock BIOPOLYMER MODIFICATION GO - Biological Process.gmt GeneSets -1.6 0.04505 512.0 8.0 4.21
HIVvsMockinLatency-Up in-Mock HOMEOSTATIC PROCESS GO - Biological Process.gmt GeneSets -5.5 1.0E-4 107.0 7.0 0.88
HIVvsMockinLatency-Up in-Mock CELLULAR HOMEOSTASIS GO - Biological Process.gmt GeneSets -5.8 1.0E-4 68.0 6.0 0.56
HIVvsMockinLatency-Up in-Mock SECRETION GO - Biological Process.gmt GeneSets -2.0 0.02258 103.0 3.0 0.85
HIVvsMockinLatency-Up in-Mock REGULATION OF CATALYTIC ACTIVITY GO - Biological Process.gmt GeneSets -2.3 0.01287 193.0 5.0 1.59
HIVvsMockinLatency-Up in-Mock PEPTIDYL TYROSINE PHOSPHORYLATION GO - Biological Process.gmt GeneSets -4.6 3.0E-4 20.0 3.0 0.16
HIVvsMockinLatency-Up in-Mock PEPTIDYL AMINO ACID MODIFICATION GO - Biological Process.gmt GeneSets -3.2 0.00258 47.0 3.0 0.39
HIVvsMockinLatency-Up in-Mock CELL PROLIFERATION GO 0008283 GO - Biological Process.gmt GeneSets -1.6 0.04554 351.0 6.0 2.89
HIVvsMockinLatency-Up in-Mock IMMUNE SYSTEM PROCESS GO - Biological Process.gmt GeneSets -2.9 0.00439 200.0 6.0 1.65
HIVvsMockinLatency-Up in-Mock ANATOMICAL STRUCTURE DEVELOPMENT GO - Biological Process.gmt GeneSets -2.0 0.02072 511.0 9.0 4.2
HIVvsMockinLatency-Up in-Mock PEPTIDYL TYROSINE MODIFICATION GO - Biological Process.gmt GeneSets -4.5 3.0E-4 21.0 3.0 0.17
HIVvsMockinLatency-Up in-Mock POSITIVE REGULATION OF CELLULAR METABOLIC PROCESS GO - Biological Process.gmt GeneSets -2.6 0.00714 166.0 5.0 1.37
HIVvsMockinLatency-Up in-Mock POSITIVE REGULATION OF BIOLOGICAL PROCESS GO - Biological Process.gmt GeneSets -2.5 0.00813 508.0 10.0 4.18
HIVvsMockinLatency-Up in-Mock RESPONSE TO EXTERNAL STIMULUS GO - Biological Process.gmt GeneSets -5.5 1.0E-4 143.0 8.0 1.18
HIVvsMockinLatency-Up in-Mock WOUND HEALING GO - Biological Process.gmt GeneSets -4.2 4.5E-4 26.0 3.0 0.21
HIVvsMockinLatency-Up in-Mock COAGULATION GO - Biological Process.gmt GeneSets -4.5 3.0E-4 21.0 3.0 0.17
HIVvsMockinLatency-Up in-Mock NEGATIVE REGULATION OF METABOLIC PROCESS GO - Biological Process.gmt GeneSets -2.2 0.01494 201.0 5.0 1.65
HIVvsMockinLatency-Up in-Mock CHEMICAL HOMEOSTASIS GO - Biological Process.gmt GeneSets -4.5 3.0E-4 73.0 5.0 0.6
HIVvsMockinLatency-Up in-Mock REGULATION OF METABOLIC PROCESS GO - Biological Process.gmt GeneSets -1.9 0.0272 622.0 10.0 5.12
HIVvsMockinLatency-Up in-Mock CELLULAR LOCALIZATION GO - Biological Process.gmt GeneSets -2.5 0.00809 295.0 7.0 2.43
HIVvsMockinLatency-Up in-Mock ION HOMEOSTASIS GO - Biological Process.gmt GeneSets -5.0 1.7E-4 59.0 5.0 0.49
HIVvsMockinLatency-Up in-Mock POSITIVE REGULATION OF PROTEIN METABOLIC PROCESS GO - Biological Process.gmt GeneSets -3.1 0.00301 50.0 3.0 0.41
HIVvsMockinLatency-Up in-Mock PROTEIN MODIFICATION PROCESS GO - Biological Process.gmt GeneSets -1.7 0.03764 495.0 8.0 4.07
HIVvsMockinLatency-Up in-Mock PROTEIN AMINO ACID PHOSPHORYLATION GO - Biological Process.gmt GeneSets -2.1 0.01947 214.0 5.0 1.76
HIVvsMockinLatency-Up in-Mock APOPTOTIC PROGRAM GO - Biological Process.gmt GeneSets -3.2 0.00258 47.0 3.0 0.39
HIVvsMockinLatency-Up in-Mock CATION HOMEOSTASIS GO - Biological Process.gmt GeneSets -5.3 1.1E-4 52.0 5.0 0.43
HIVvsMockinLatency-Up in-Mock RESPONSE TO WOUNDING GO - Biological Process.gmt GeneSets -5.0 1.7E-4 89.0 6.0 0.73
HIVvsMockinLatency-Up in-Mock POSITIVE REGULATION OF CELLULAR PROCESS GO - Biological Process.gmt GeneSets -2.7 0.00644 485.0 10.0 3.99
HIVvsMockinLatency-Up in-Mock G PROTEIN COUPLED RECEPTOR PROTEIN SIGNALING PATHWAY GO - Biological Process.gmt GeneSets -2.5 0.00809 119.0 4.0 0.98
HIVvsMockinLatency-Up in-Mock PHOSPHORYLATION GO - Biological Process.gmt GeneSets -1.8 0.02775 238.0 5.0 1.96
HIVvsMockinLatency-Up in-Mock NEGATIVE REGULATION OF BIOLOGICAL PROCESS GO - Biological Process.gmt GeneSets -1.7 0.03762 494.0 8.0 4.06
HIVvsMockinLatency-Up in-Mock REGULATION OF CELLULAR PROTEIN METABOLIC PROCESS GO - Biological Process.gmt GeneSets -4.2 4.5E-4 120.0 6.0 0.99
HIVvsMockinLatency-Up in-Mock TRANSMEMBRANE RECEPTOR PROTEIN TYROSINE KINASE SIGNALING PATHWAY GO - Biological Process.gmt GeneSets -2.9 0.00431 57.0 3.0 0.47
HIVvsMockinLatency-Up in-Mock ORGAN DEVELOPMENT GO - Biological Process.gmt GeneSets -2.0 0.0201 284.0 6.0 2.34
HIVvsMockinLatency-Up in-Mock TYROSINE PHOSPHORYLATION OF STAT PROTEIN GO - Biological Process.gmt GeneSets -6.1 1.0E-4 9.0 3.0 0.07
HIVvsMockinLatency-Up in-Mock INTRACELLULAR SIGNALING CASCADE GO - Biological Process.gmt GeneSets -2.2 0.01442 477.0 9.0 3.92
HIVvsMockinLatency-Up in-Mock CELLULAR DEFENSE RESPONSE GO - Biological Process.gmt GeneSets -4.1 5.1E-4 28.0 3.0 0.23
HIVvsMockinLatency-Up in-Mock REGULATION OF BINDING GO - Biological Process.gmt GeneSets -3.1 0.00311 51.0 3.0 0.42
HIVvsMockinLatency-Up in-Mock REGULATION OF CELL PROLIFERATION GO - Biological Process.gmt GeneSets -2.2 0.01543 203.0 5.0 1.67
HIVvsMockinLatency-Up in-Mock INTRINSIC TO PLASMA MEMBRANE GO - Cellular Component.gmt GeneSets -6.6 0.0 464.0 16.0 3.82
HIVvsMockinLatency-Up in-Mock INTRINSIC TO MEMBRANE GO - Cellular Component.gmt GeneSets -4.8 2.0E-5 699.0 17.0 5.75
HIVvsMockinLatency-Up in-Mock MEMBRANE PART GO - Cellular Component.gmt GeneSets -4.2 7.0E-5 927.0 19.0 7.63
HIVvsMockinLatency-Up in-Mock GOLGI APPARATUS GO - Cellular Component.gmt GeneSets -1.7 0.01957 187.0 4.0 1.54
HIVvsMockinLatency-Up in-Mock MEMBRANE GO - Cellular Component.gmt GeneSets -3.8 1.4E-4 1140.0 21.0 9.38
HIVvsMockinLatency-Up in-Mock INTEGRAL TO MEMBRANE GO - Cellular Component.gmt GeneSets -4.9 1.0E-5 690.0 17.0 5.68
HIVvsMockinLatency-Up in-Mock INTEGRAL TO PLASMA MEMBRANE GO - Cellular Component.gmt GeneSets -6.7 0.0 459.0 16.0 3.78
HIVvsMockinLatency-Up in-Mock RECEPTOR COMPLEX GO - Cellular Component.gmt GeneSets -3.6 2.6E-4 37.0 3.0 0.3
HIVvsMockinLatency-Up in-Mock PLASMA MEMBRANE PART GO - Cellular Component.gmt GeneSets -6.8 0.0 560.0 18.0 4.61
HIVvsMockinLatency-Up in-Mock PLASMA MEMBRANE GO - Cellular Component.gmt GeneSets -6.4 0.0 716.0 20.0 5.89
HIVvsMockinLatency-Up in-Mock PROTEIN HOMODIMERIZATION ACTIVITY GO - Molecular Function.gmt GeneSets -2.3 0.00551 85.0 3.0 0.7
HIVvsMockinLatency-Up in-Mock IDENTICAL PROTEIN BINDING GO - Molecular Function.gmt GeneSets -1.4 0.04208 230.0 4.0 1.89
HIVvsMockinLatency-Up in-Mock RHODOPSIN LIKE RECEPTOR ACTIVITY GO - Molecular Function.gmt GeneSets -4.4 4.0E-5 23.0 3.0 0.19
HIVvsMockinLatency-Up in-Mock G PROTEIN COUPLED RECEPTOR ACTIVITY GO - Molecular Function.gmt GeneSets -3.3 5.0E-4 44.0 3.0 0.36
HIVvsMockinLatency-Up in-Mock RECEPTOR BINDING GO - Molecular Function.gmt GeneSets -1.7 0.01957 187.0 4.0 1.54
HIVvsMockinLatency-Up in-Mock RECEPTOR ACTIVITY GO - Molecular Function.gmt GeneSets -5.6 0.0 274.0 11.0 2.25
HIVvsMockinLatency-Up in-Mock TRANSMEMBRANE RECEPTOR ACTIVITY GO - Molecular Function.gmt GeneSets -4.0 1.1E-4 177.0 7.0 1.46
HIVvsMockinLatency-Up in-Mock PROTEIN DIMERIZATION ACTIVITY GO - Molecular Function.gmt GeneSets -1.6 0.02354 131.0 3.0 1.08
HIVvsMockinLatency-Up in-Mock HIV Schoggins et al 2011 HIV Collection.gmt GeneSets -3.1 8.1E-4 238.0 7.0 1.96
HIVvsMockinLatency-Up in-Mock KEGG CYTOKINE CYTOKINE RECEPTOR INTERACTION Pathways - KEGG_BioCarta.gmt GeneSets -4.0 1.0E-4 129.0 6.0 1.06
HIVvsMockinLatency-Up in-Mock KEGG CHEMOKINE SIGNALING PATHWAY Pathways - KEGG_BioCarta.gmt GeneSets -4.1 7.0E-5 123.0 6.0 1.01
HIVvsMockinLatency-Up in-Mock KEGG NEUROACTIVE LIGAND RECEPTOR INTERACTION Pathways - KEGG_BioCarta.gmt GeneSets -2.7 0.002 64.0 3.0 0.53
HIVvsMockinLatency-Up in-Mock KEGG ENDOCYTOSIS Pathways - KEGG_BioCarta.gmt GeneSets -2.0 0.0096 156.0 4.0 1.28
HIVvsMockinLatency-Up in-Mock KEGG FOCAL ADHESION Pathways - KEGG_BioCarta.gmt GeneSets -1.5 0.03176 144.0 3.0 1.18
HIVvsMockinLatency-Up in-Mock KEGG TOLL LIKE RECEPTOR SIGNALING PATHWAY Pathways - KEGG_BioCarta.gmt GeneSets -2.5 0.00306 72.0 3.0 0.59
HIVvsMockinLatency-Up in-Mock KEGG NATURAL KILLER CELL MEDIATED CYTOTOXICITY Pathways - KEGG_BioCarta.gmt GeneSets -4.1 8.0E-5 86.0 5.0 0.71
HIVvsMockinLatency-Up in-Mock KEGG GRAFT VERSUS HOST DISEASE Pathways - KEGG_BioCarta.gmt GeneSets -4.2 7.0E-5 26.0 3.0 0.21
HIVvsMockinLatency-Up in-Mock Chemokine receptors bind chemokines Pathways - Reactome.gmt GeneSets -6.4 0.0 18.0 4.0 0.15
HIVvsMockinLatency-Up in-Mock Class A/1 (Rhodopsin-like receptors) Pathways - Reactome.gmt GeneSets -6.7 0.0 75.0 7.0 0.62
HIVvsMockinLatency-Up in-Mock Cytokine Signaling in Immune system Pathways - Reactome.gmt GeneSets -2.5 0.00322 233.0 6.0 1.92
HIVvsMockinLatency-Up in-Mock Factors involved in megakaryocyte development and platelet production Pathways - Reactome.gmt GeneSets -2.2 0.00698 91.0 3.0 0.75
HIVvsMockinLatency-Up in-Mock G alpha (i) signalling events Pathways - Reactome.gmt GeneSets -2.6 0.00237 67.0 3.0 0.55
HIVvsMockinLatency-Up in-Mock G alpha (q) signalling events Pathways - Reactome.gmt GeneSets -2.5 0.00322 73.0 3.0 0.6
HIVvsMockinLatency-Up in-Mock GPCR downstream signaling Pathways - Reactome.gmt GeneSets -4.3 5.0E-5 204.0 8.0 1.68
HIVvsMockinLatency-Up in-Mock GPCR ligand binding Pathways - Reactome.gmt GeneSets -6.4 0.0 114.0 8.0 0.94
HIVvsMockinLatency-Up in-Mock Hemostasis Pathways - Reactome.gmt GeneSets -3.6 2.6E-4 312.0 9.0 2.57
HIVvsMockinLatency-Up in-Mock Immune System Pathways - Reactome.gmt GeneSets -1.6 0.02809 694.0 10.0 5.71
HIVvsMockinLatency-Up in-Mock Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell Pathways - Reactome.gmt GeneSets -3.3 5.4E-4 45.0 3.0 0.37
HIVvsMockinLatency-Up in-Mock Interferon Signaling Pathways - Reactome.gmt GeneSets -1.5 0.03107 143.0 3.0 1.18
HIVvsMockinLatency-Up in-Mock Ion channel transport Pathways - Reactome.gmt GeneSets -5.8 0.0 24.0 4.0 0.2
HIVvsMockinLatency-Up in-Mock Ion transport by P-type ATPases Pathways - Reactome.gmt GeneSets -6.0 0.0 22.0 4.0 0.18
HIVvsMockinLatency-Up in-Mock Peptide ligand-binding receptors Pathways - Reactome.gmt GeneSets -6.1 0.0 39.0 5.0 0.32
HIVvsMockinLatency-Up in-Mock "Platelet activation, signaling and aggregation" Pathways - Reactome.gmt GeneSets -3.0 0.00101 138.0 5.0 1.14
HIVvsMockinLatency-Up in-Mock Signal Transduction Pathways - Reactome.gmt GeneSets -2.7 0.00204 787.0 14.0 6.47
HIVvsMockinLatency-Up in-Mock Signaling by GPCR Pathways - Reactome.gmt GeneSets -4.4 4.0E-5 246.0 9.0 2.02
HIVvsMockinLatency-Up in-Mock Signaling by Interleukins Pathways - Reactome.gmt GeneSets -2.1 0.00725 92.0 3.0 0.76
HIVvsMockinLatency-Up in-Mock Transmembrane transport of small molecules Pathways - Reactome.gmt GeneSets -2.4 0.00405 243.0 6.0 2.0
HIVvsMockinLatency-Up in-Mock AAAYRNCTG UNKNOWN TF_miRNA Targets.gmt GeneSets -1.7 0.04077 184.0 4.0 1.51
HIVvsMockinLatency-Up in-Mock V$AP4 01 TF_miRNA Targets.gmt GeneSets -1.7 0.04123 124.0 3.0 1.02
HIVvsMockinLatency-Up in-Mock V$NFKAPPAB65 01 TF_miRNA Targets.gmt GeneSets -1.7 0.04126 126.0 3.0 1.04
HIVvsMockinLatency-Up in-Mock V$HEN1 02 TF_miRNA Targets.gmt GeneSets -1.9 0.03341 109.0 3.0 0.9
HIVvsMockinLatency-Up in-Mock V$IRF1 01 TF_miRNA Targets.gmt GeneSets -2.4 0.02691 123.0 4.0 1.01
HIVvsMockinLatency-Up in-Mock V$CEBPB 01 TF_miRNA Targets.gmt GeneSets -2.4 0.02691 129.0 4.0 1.06
HIVvsMockinLatency-Up in-Mock V$CEBPA 01 TF_miRNA Targets.gmt GeneSets -1.7 0.04096 122.0 3.0 1.0
HIVvsMockinLatency-Up in-Mock V$AP4 Q5 TF_miRNA Targets.gmt GeneSets -2.3 0.02691 131.0 4.0 1.08
HIVvsMockinLatency-Up in-Mock V$SRF Q6 TF_miRNA Targets.gmt GeneSets -1.6 0.04501 133.0 3.0 1.09
HIVvsMockinLatency-Up in-Mock V$NF1 Q6 TF_miRNA Targets.gmt GeneSets -1.6 0.04269 130.0 3.0 1.07
HIVvsMockinLatency-Up in-Mock V$MEF2 02 TF_miRNA Targets.gmt GeneSets -2.0 0.03341 101.0 3.0 0.83
HIVvsMockinLatency-Up in-Mock V$CHOP 01 TF_miRNA Targets.gmt GeneSets -1.7 0.04123 124.0 3.0 1.02
HIVvsMockinLatency-Up in-Mock V$TATA 01 TF_miRNA Targets.gmt GeneSets -3.6 0.00811 104.0 5.0 0.86
HIVvsMockinLatency-Up in-Mock V$ISRE 01 TF_miRNA Targets.gmt GeneSets -2.6 0.02532 116.0 4.0 0.95
HIVvsMockinLatency-Up in-Mock V$NFAT Q6 TF_miRNA Targets.gmt GeneSets -3.4 0.00872 117.0 5.0 0.96
HIVvsMockinLatency-Up in-Mock V$PAX4 03 TF_miRNA Targets.gmt GeneSets -1.6 0.04674 135.0 3.0 1.11
HIVvsMockinLatency-Up in-Mock V$PAX4 04 TF_miRNA Targets.gmt GeneSets -1.9 0.03341 109.0 3.0 0.9
HIVvsMockinLatency-Up in-Mock V$IRF7 01 TF_miRNA Targets.gmt GeneSets -2.3 0.0279 135.0 4.0 1.11
HIVvsMockinLatency-Up in-Mock CTGCAGY UNKNOWN TF_miRNA Targets.gmt GeneSets -1.9 0.03341 376.0 7.0 3.09
HIVvsMockinLatency-Up in-Mock V$PAX2 02 TF_miRNA Targets.gmt GeneSets -1.7 0.04077 121.0 3.0 1.0
HIVvsMockinLatency-Up in-Mock V$STAT5A 03 TF_miRNA Targets.gmt GeneSets -1.8 0.03589 113.0 3.0 0.93
HIVvsMockinLatency-Up in-Mock V$STAT6 01 TF_miRNA Targets.gmt GeneSets -1.7 0.04109 123.0 3.0 1.01
HIVvsMockinLatency-Up in-Mock V$RP58 01 TF_miRNA Targets.gmt GeneSets -2.2 0.02974 89.0 3.0 0.73
HIVvsMockinLatency-Up in-Mock V$AFP1 Q6 TF_miRNA Targets.gmt GeneSets -1.8 0.03624 114.0 3.0 0.94
HIVvsMockinLatency-Up in-Mock V$TEF Q6 TF_miRNA Targets.gmt GeneSets -2.4 0.02691 123.0 4.0 1.01
HIVvsMockinLatency-Up in-Mock V$ICSBP Q6 TF_miRNA Targets.gmt GeneSets -2.4 0.02691 125.0 4.0 1.03
HIVvsMockinLatency-Up in-Mock V$COREBINDINGFACTOR Q6 TF_miRNA Targets.gmt GeneSets -1.7 0.04126 127.0 3.0 1.04
HIVvsMockinLatency-Up in-Mock V$CIZ 01 TF_miRNA Targets.gmt GeneSets -1.8 0.03681 115.0 3.0 0.95
HIVvsMockinLatency-Up in-Mock V$CEBP Q2 01 TF_miRNA Targets.gmt GeneSets -1.6 0.04206 129.0 3.0 1.06
HIVvsMockinLatency-Up in-Mock V$CP2 02 TF_miRNA Targets.gmt GeneSets -1.8 0.04025 120.0 3.0 0.99
HIVvsMockinLatency-Up in-Mock V$PR Q2 TF_miRNA Targets.gmt GeneSets -1.8 0.03831 117.0 3.0 0.96
HIVvsMockinLatency-Up in-Mock GTGGGTGK UNKNOWN TF_miRNA Targets.gmt GeneSets -2.2 0.02902 138.0 4.0 1.14
HIVvsMockinLatency-Up in-Mock ATGAAGG,MIR-205 TF_miRNA Targets.gmt GeneSets -1.9 0.03558 112.0 3.0 0.92
HIVvsMockinLatency-Up in-Mock TCATCTC,MIR-143 TF_miRNA Targets.gmt GeneSets -2.0 0.03341 101.0 3.0 0.83
HIVvsMockinLatency-Up in-Mock TGCTTTG,MIR-330 TF_miRNA Targets.gmt GeneSets -1.6 0.04767 203.0 4.0 1.67
HIVvsMockinLatency-Up in-Mock SMTTTTGT UNKNOWN TF_miRNA Targets.gmt GeneSets -2.0 0.03341 224.0 5.0 1.84
HIVvsMockinLatency-Up in-Mock TCCATTKW UNKNOWN TF_miRNA Targets.gmt GeneSets -1.6 0.04438 132.0 3.0 1.09
HIVvsMockinLatency-Up in-Mock WTGAAAT UNKNOWN TF_miRNA Targets.gmt GeneSets -1.6 0.04822 278.0 5.0 2.29
HIVvsMockinLatency-Up in-Mock RACCACAR V$AML Q6 TF_miRNA Targets.gmt GeneSets -1.6 0.04822 138.0 3.0 1.14
HIVvsMockinLatency-Up in-Mock CAGGTA V$AREB6 01 TF_miRNA Targets.gmt GeneSets -2.1 0.03315 347.0 7.0 2.85
HIVvsMockinLatency-Up in-Mock CAGGTG V$E12 Q6 TF_miRNA Targets.gmt GeneSets -2.0 0.03341 1124.0 16.0 9.25
HIVvsMockinLatency-Up in-Mock GCANCTGNY V$MYOD Q6 TF_miRNA Targets.gmt GeneSets -2.1 0.03315 421.0 8.0 3.46
HIVvsMockinLatency-Up in-Mock TATAAA V$TATA 01 TF_miRNA Targets.gmt GeneSets -2.1 0.03315 495.0 9.0 4.07
Download list of genes
Gene expression pattern of HIVvsMockinLatency-Up_in-Mock
Figure: : Temporal expression patterns are displayed according to the selected conditions and comparisons. Only infected conditions are displayed, during latency as gray lines or during activation according to the color code for each drug. For individual genes, select one from the table below.
List of genes
Name Fold p p-Adj
7053 1.8705275 4.0898835E-6 7.3393935E-4
705082 0.59276885 4.7487815E-4 0.035262626
736850 0.64464045 9.472477E-5 0.010055501
768978 1.0940622 1.942579E-9 8.873465E-7
787283 1.1854614 4.2182446E-4 0.032441743
67677653 2.4375262 1.9559823E-6 3.9312633E-4
67685665 2.16586 0.0 0.0
67767875 2.8834424 0.0 0.0
67838455 0.5899193 4.679567E-4 0.03492069
68688852 1.4983664 2.1693477E-5 0.0029727952
71668053 0.6720148 4.9026727E-5 0.005819125
71787689 5.1413774 4.073292E-7 1.0233467E-4
71907766 2.3539724 0.0 0.0
72738049 1.212292 1.25619515E-11 9.017088E-9
72807168 0.63841134 6.3715223E-4 0.043241996
73717049 1.3026233 1.1176626E-10 6.479864E-8
78697072 0.9262409 1.4156814E-6 2.923285E-4
78757155 1.4797174 1.6273253E-9 7.830172E-7
80827049 0.9357301 2.4058838E-5 0.0032672335
82668074 0.71276456 1.6458398E-5 0.0023976592
82687749 1.1167967 4.294189E-4 0.032858174
83726752 1.0698225 3.7401125E-5 0.0046982043
84768251 0.8112455 3.1285395E-4 0.02605503
84826867 1.0222081 2.7010584E-8 9.930672E-6
88677649 3.3282394 0.0 0.0
6568826650 1.6175772 1.110223E-16 1.6735502E-13
6580797652 0.7165324 3.021237E-4 0.02544253
6665676950 1.1037714 9.2317414E-8 2.8991515E-5
6683808289 0.81597817 1.405557E-4 0.014219709
6765838352 0.76666117 9.53244E-6 0.0015790331
6768725051 0.7225045 1.5999549E-5 0.0023644825
6769828354 0.61066526 2.8018694E-4 0.023997374
6788678251 0.8734033 1.0066189E-5 0.0016493232
6788678252 1.0108101 1.4557654E-9 7.3147356E-7
6879677553 1.4755958 1.4512473E-9 7.3147356E-7
7067827654 1.0330026 1.4321493E-8 5.996728E-6
7079888051 1.3725576 2.404188E-12 1.907407E-9
7180824953 0.6615639 2.4474837E-4 0.021830397
7269826753 0.7878412 5.600064E-5 0.0064934897
7375907050 0.69244176 4.3736636E-5 0.0053168233
7384716550 0.6805788 3.4124867E-4 0.027956426
7573705365 0.65495443 1.9915155E-4 0.019000065
7576826849 1.4054102 1.5631109E-4 0.015708223
7576827549 2.120712 1.2156942E-13 1.1453359E-10
7665738250 0.72507226 4.693934E-5 0.0056605088
7680658253 0.6235773 4.138115E-4 0.03215358
7789794968 0.73453015 3.5091194E-5 0.0044557173
7789794969 0.9800946 1.02304206E-7 3.1472115E-5
7880848882 1.0928813 1.6701222E-5 0.0023976592
7884827550 1.434934 1.4432899E-15 1.6735502E-12
8050828949 1.1659551 1.0348144E-6 2.2283991E-4
8084677249 0.8650311 5.9050426E-4 0.041019637
8084808277 1.1584991 2.3891372E-8 9.003464E-6
8266778351 1.0925764 4.457018E-6 7.9041277E-4
8284757850 1.795364 0.0 0.0
8369808451 0.8617678 1.0548419E-4 0.011042143
8466885049 0.9495452 1.2930728E-7 3.8983562E-5
8473717384 2.3578186 3.514562E-8 1.2613931E-5
8482668657 0.71599245 2.7920369E-5 0.0036597534
8583804956 1.3889402 1.2170547E-5 0.0018913281
8980697649 0.58825773 5.6038273E-4 0.039779212
656865775050 0.6912215 1.8794405E-4 0.018160697
658480494865 0.6737811 5.5036046E-5 0.006431111
658480496551 0.8876632 1.0675226E-5 0.0017179453
658480566651 0.6605197 3.5215652E-4 0.028694095
658480566652 0.6092085 2.6895755E-4 0.023435064
676768674953 0.70681614 6.269999E-4 0.042960893
678370508266 0.7933367 4.8118716E-5 0.0057566785
686980686755 1.0052372 3.7417124E-8 1.3116877E-5
688089837650 0.6764456 6.9756694E-5 0.0077973274
726586678250 0.71253693 1.1131882E-4 0.011493287
737170668051 1.0593597 3.1572436E-6 5.8039377E-4
737651498265 1.2971504 1.10958235E-5 0.0017606152
757370505465 2.42997 3.996803E-15 4.303415E-12
767376828050 1.8903455 5.6852967E-11 3.57084E-8
776580517556 0.591574 5.72906E-4 0.04004269
808972737849 1.0262465 1.549161E-7 4.4060474E-5
828076515780 0.79505306 4.4703894E-4 0.03403366
837077668450 0.696276 3.20961E-5 0.0041708327
837665777055 1.144488 1.4704904E-11 1.0075532E-8
837667506556 0.61099946 4.0938437E-4 0.031974405
838978718251 0.59467584 7.440701E-4 0.049410187
848265865052 0.6735413 5.525937E-4 0.03947771
848265865148 0.96968174 3.0544848E-6 5.684359E-4
848265865249 0.82628834 1.3837796E-5 0.0021069793
856688784948 0.96851707 1.6739368E-7 4.6727637E-5
907870545651 2.0408216 8.881784E-16 1.1157001E-12
65706580497650 1.1344808 2.104681E-9 9.3311655E-7
67898052705050 0.7761225 2.5853785E-4 0.022685494
68897867507249 0.73975676 2.7627536E-4 0.02392256
70657749505366 0.9383817 1.7097338E-5 0.0024086474
70657749514966 1.1126934 8.312161E-8 2.6659047E-5
78856884495480 0.7719244 5.199235E-4 0.03749917
80807073668050 0.9822946 3.9900235E-7 1.0194172E-4
80826571777378 0.5784846 6.841041E-4 0.04572594
82658371827050 0.9233568 3.253153E-4 0.026796738
83766750556550 0.6217415 4.7828248E-4 0.035341322
83766752654948 2.136409 0.0 0.0
83845683736549 1.272916 6.4210988E-9 2.7654755E-6
84826686534552 0.64145887 1.8469185E-4 0.01796158
84826686534553 0.64082295 6.8555545E-4 0.04572594
84826686534554 0.8833277 9.3691784E-7 2.0468261E-4
84826686554554 1.5930359 3.2795988E-13 2.9080396E-10
84826686554555 0.76554865 2.2518678E-4 0.020517418
6749551111141025454 1.8070182 7.858103E-5 0.008700265
6749111114102495655 1.3257952 4.6471067E-4 0.034857895
7065774956576549 1.157208 1.0854363E-6 2.2724817E-4
7384808273807650 0.87282807 2.321203E-7 6.138564E-5
8376675050654955 0.6689163 4.9670704E-4 0.03652372
8478708370495166 1.0849147 4.5431015E-4 0.034413423
8482658649504551 0.7564701 1.071294E-5 0.0017179453
8482668649494550 0.6449774 2.0781648E-4 0.019457301
8482668650484549 0.61717486 2.1491747E-4 0.01975406
767378674848505549 1.454653 5.624806E-4 0.039779212
827080764945658349 1.0028783 2.2530664E-6 4.3541953E-4
65674848545057514651 1.7353776 2.1123103E-12 1.7689425E-9
65674848555154504649 0.78910106 4.6480275E-4 0.034857895
65674849554848504649 0.8193703 2.1584987E-5 0.0029727952
6569484848545449465155 0.9628836 5.5959504E-6 9.5856085E-4
8280494945575273504649 1.129269 1.31003E-5 0.00201504
828049494551568050504650 1.1864896 4.1569074E-8 1.3622005E-5
82804949455055558049504655 2.001127 9.10918E-11 5.4924712E-8
82804949455150538049534651 1.0247779 1.5301225E-7 4.4060474E-5
82804949455450547149494651 0.8368955 2.4438696E-5 0.0032891866